Flagship Pioneering, LLC

In its 13F for Q1 2024 (holdings as of March 31, 2024, filed May 15, 2024), Flagship Pioneering, LLC reported 7 stock positions worth $1.5 billion. Its top holding was Moderna (MRNA) at 67.6% of the portfolio, followed by Sana Biotechnology (SANA, 16.4%) and Omega Therapeutics (OMGAQ, 7.0%). Compared with Q4 2023, it added to 1 and reduced 1. The biggest buy was Syros Pharmaceuticals (SYRS, shares −0%) and the biggest sale Denali Therapeutics (DNLI, shares −41%).

Most Recent 13F
Q2 2026
Location
CAMBRIDGE, MA
CIK
0001400240
Portfolio Value
$1.5B (Q1 2024)
SEC Filing
0000950123-24-005589 ↗ filed May 15, 2024

Holdings Value

0$500.0M$1.0B$1.5B$2.0B Q1 2024: $1.5B $1.5B Q1 2024 Q2 2024: $843.4M Q2 2024 Q3 2024: $591.9M Q3 2024 Q4 2024: $334.2M Q4 2024 Q1 2025: $235.8M Q1 2025 Q2 2025: $268.5M Q2 2025 Q3 2025: $292.6M Q3 2025 Q4 2025: $324.0M Q4 2025 Q1 2026: $1.2B Q1 2026 Q2 2026: $1.5B Q2 2026

Holdings 7 stocks · $1.5B

MRNA Moderna Inc. 67.56% 9,666,038 $1.0B No change
SANA Sana Biotechnology Inc. 16.40% 25,001,856 $250.0M No change
OMGAQ Omega Therapeutics Inc. 7.00% 29,225,579 $106.7M No change
FHTX Foghorn Therapeutics Inc. 5.58% 12,674,120 $85.0M No change
DNLI Denali Therapeutics Inc. 1.84% 1,364,516 $28.0M Reduce -41.2%
MCRB Seres Therapeutics Inc. 1.17% 23,117,045 $17.9M No change
SYRS Syros Pharmaceuticals Inc. 0.45% 1,293,849 $6.9M Add +0.0%

Portfolio Sells Q4 2023 → Q1 2024

DNLI Denali Therapeutics Inc. Reduce -41.2% 1.84% −1.92

Portfolio Buys Q4 2023 → Q1 2024

SYRS Syros Pharmaceuticals Inc. Add +0.0% 0.45% −0.31

All Filings

QuarterPositions13F Reported ValueTop Holdings
Q2 2026 5$1.5BGENB, MRNA, SANA, FHTX, MCRB
Q1 2026 5$1.2BGENB, MRNA, SANA, FHTX, MCRB
Q4 2025 4$324.0MMRNA, SANA, FHTX, MCRB
Q3 2025 4$292.6MMRNA, SANA, FHTX, MCRB
Q2 2025 4$268.5MMRNA, SANA, FHTX, MCRB
Q1 2025 4$235.8MMRNA, FHTX, SANA, MCRB
Q4 2024 5$334.2MMRNA, FHTX, SANA, OMGAQ, MCRB
Q3 2024 6$591.9MMRNA, FHTX, SANA, OMGAQ, MCRB
Q2 2024 6$843.4MMRNA, SANA, FHTX, OMGAQ, MCRB
Q1 2024 7$1.5BMRNA, SANA, OMGAQ, FHTX, DNLI